Computational Modelling — Benchmark Investigation of SCC-DFTB against Standard and Hybrid DFT to Model Electronic Properties in Two-Dimensional MOFs for Thermoelectric Applications

Measurement evidence

Computational Modelling

Benchmark Investigation of SCC-DFTB against Standard and Hybrid DFT to Model Electronic Properties in Two-Dimensional MOFs for Thermoelectric Applications · Mahmoudi Gahrouei M., Vlastos N., D'Souza R. et al. · Journal of Chemical Theory and Computation · 2024 · 3976-3992

11 measurement groups · 53 results

Reported values remain attached to the sample, method, conditions, extraction quality and source location that produced them.

DFT-PBE, GFN1-xTB, GFN2-xTB band structure and BoltzTraP2 TE calculations

Cd3C6O6 monolayer model · Model

Cd3C6O6 monolayer, AA-stacked, and AB-stacked/third stacked geometry compared; transport calculated at 300 K.

Temperature
300
Atmosphere
not_applicable
Geometry
periodic cells
Context
model_system
Measurement source
SI text around Figures S18-S21 · Supporting Information · Figures S18-S21
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
Cd3C6O6 stacked electronic behaviourAA- and AB-stacked Cd3C6O6 computed by DFT-PBE and GFN1-xTB showed metallic behaviourText
Qualitative
main p.6, article p.3981 · Results and Discussion · Figure S18
Cd3C6O6 AA-stacked power-factor increase relative to Zn3C6O6 AA-stackedaround 0.2 mW m^-1 K^-2 higher with DFT-PBEText
Approximate
main p.8, article p.3983 · Thermoelectric Properties · Figure S20
Cd3C6O6 AA-stacked electrical-conductivity increase relative to Zn3C6O6 AA-stackedaround 2 x 10^5 ohm^-1 m^-1 higher with DFT-PBE200000 ohm^-1 m^-1Text
Approximate
main p.8, article p.3983 · Thermoelectric Properties · Figure S20
Cd3C6O6 monolayer electronic behavioursemimetallic with GFN1-xTB; semiconducting with GFN2-xTB and DFT-PBEText
Qualitative
main p.6, article p.3981 · Results and Discussion · Figure S18
Cd3C6O6 monolayer power-factor decrease relative to Zn3C6O6 monolayerdecrease of 0.2 mW m^-1 K^-2Text
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure S19

VASP DFT-PBE/PBE+U/DFT-D3, DFT-HSE06, DFTB+ SCC-DFTB/3ob or mio, GFN1-xTB, GFN2-xTB; VASPKIT; BoltzTraP2

Zn3C6O6 monolayer model · Model

PBE+U with U = 3 eV and J = 0 for localised d orbitals; 550 eV plane-wave cutoff; DFT-D3 zero damping; energy convergence 1e-5 eV; force convergence 0.01 eV/A for DFT and 1e-4 eV/A for DFTB; BoltzTraP2 at 300 K with constant relaxation time 1e-14 s.

Temperature
300 for thermoelectric transport
Atmosphere
not_applicable
Geometry
periodic computational cell
Context
model_system
Measurement source
main pp.3-4, article pp.3978-3979 · Theoretical Calculations
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource

CPU-hours for optimisation, DOS, and band-structure calculations

Zn3C6O6 monolayer model · Model

Simulation-time comparison across DFT-PBE, DFT-HSE06, DFTB-3ob/mio, GFN1-xTB, and GFN2-xTB for modelled MOFs.

Atmosphere
not_applicable
Geometry
computational benchmark
Context
model_system
Measurement source
main p.6, article p.3981 · Results and Discussion · Table 1
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
CPU-hours for Cd3C6O6 monolayer DFT-PBE calculation set57 CPU-hoursTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1
CPU-hours for Cd3C6O6 monolayer GFN1-xTB calculation setMarked as a best value within this paper0.5 CPU-hoursTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1
CPU-hours for Ni3(HITP)2 monolayer DFT-PBE calculation set765 CPU-hoursTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1
CPU-hours for Ni3(HITP)2 monolayer GFN1-xTB calculation setMarked as a best value within this paper2.5 CPU-hoursTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1
CPU-hours for Zn3C6O6 monolayer DFT-PBE calculation set105 CPU-hoursTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1
CPU-hours for Zn3C6O6 monolayer GFN1-xTB calculation setMarked as a best value within this paper0.6 CPU-hoursTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1
CPU-hours for Zn-NH-MOF monolayer DFT-PBE calculation set762 CPU-hoursTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1
CPU-hours for Zn-NH-MOF monolayer GFN1-xTB calculation setMarked as a best value within this paper1 CPU-hourTable
Exact Reported
main p.6, article p.3981 · Results and Discussion · Table 1

DFT-PBE, GFN1-xTB, GFN2-xTB, DFTB-mio/3ob, DFT-HSE06; BoltzTraP2

Flat AA-stacked Ni3(HITP)2 model · Model

Flat and wavy AA-stacked models compared; metallic for most methods except DFTB-mio.

Temperature
300
Atmosphere
not_applicable
Geometry
AA-stacked periodic cell
Context
model_system
Measurement source
SI text around Figure S17 · Supporting Information · Figure S17
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource

DFT-PBE, GFN1-xTB, GFN2-xTB, DFTB-mio, DFT-HSE06; band structure/DOS and BoltzTraP2

Flat Ni3(HITP)2 monolayer model · Model

Flat and wavy monolayer TE properties compared at 300 K.

Temperature
300
Atmosphere
not_applicable
Geometry
monolayer periodic cell
Context
model_system
Measurement source
main pp.6,11, article pp.3981,3986 · Results and Discussion · Figures 3 and 9
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
Ni3(HITP)2 monolayer band gap by DFT-PBE0.105 eVText
Exact Reported
main p.6, article p.3981 · Results and Discussion · Figure 3
Ni3(HITP)2 monolayer band gap by DFTB-mio/GFN-xTB/DFT-HSE06Marked as a best value within this paperapproximately 0.1 eV higher than 0.105 eV DFT-PBE, i.e. about 0.205 eVCalculated From Reported
Approximate
main p.6, article p.3981 · Results and Discussion · Figure 3
Ni3(HITP)2 monolayer Seebeck coefficient peak by DFT-PBEaround 230 uV/KText
Approximate
main p.11, article p.3986 · Thermoelectric Properties · Figure 9
Ni3(HITP)2 monolayer Seebeck coefficient peak by DFTB-mioMarked as a best value within this paperaround 700 uV/KText
Approximate
main p.11, article p.3986 · Thermoelectric Properties · Figure 9
Ni3(HITP)2 monolayer Seebeck coefficient peak by GFN-xTBaround 300 uV/KText
Approximate
main p.11, article p.3986 · Thermoelectric Properties · Figure 9
Ni3(HITP)2 monolayer Seebeck coefficient peak by DFT-HSE06around 300 uV/KText
Approximate
main p.11, article p.3986 · Thermoelectric Properties · Figure 9
Wavy Ni3(HITP)2 monolayer power-factor decrease versus flat monolayer0.1 mW m^-1 K^-2 smaller PFText
Approximate
main p.11, article p.3986 · Thermoelectric Properties · Figure 9
Wavy Ni3(HITP)2 monolayer conductivity decrease versus flat monolayeraround 0.005 x 10^5 ohm^-1 m^-1 less electrically conducting500 ohm^-1 m^-1Text
Approximate
main p.11, article p.3986 · Thermoelectric Properties · Figure 9

DFT-PBE/GFN1-xTB/DFTB-3ob/DFT-HSE06 band structure and BoltzTraP2 TE calculations

Zn3C6O6 AA-stacked model · Model

Metallic systems plotted over approximately 3 kBT window around EF; DFTB-3ob predicted wide-band-gap semiconductor instead.

Temperature
300
Atmosphere
not_applicable
Geometry
AA-stacked periodic cell
Context
model_system
Measurement source
main p.7, article p.3982 · Thermoelectric Properties · Figure S16
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
AA-stacked Zn3C6O6 Seebeck coefficient rangearound 0 to 50 uV/KrangeText
Range
main p.7, article p.3982 · Thermoelectric Properties · Figure S16
AA-stacked Zn3C6O6 electrical conductivity by DFT-PBEMarked as a best value within this paper4 x 10^5 ohm^-1 m^-1400000 ohm^-1 m^-1Text
Rounded Reported
main p.7, article p.3982 · Thermoelectric Properties · Figure S16

DFT-PBE, GFN1-xTB, GFN2-xTB, DFTB-3ob, DFT-HSE06; band structure/DOS and BoltzTraP2 thermoelectric calculations

Zn3C6O6 monolayer model · Model

Fermi energy set between valence and conduction bands for semiconductor TE plots; transport calculated at 300 K.

Temperature
300
Atmosphere
not_applicable
Geometry
monolayer periodic cell
Context
model_system
Measurement source
main pp.5,7,12, article pp.3980,3982,3987 · Results and Discussion · Figures 4, 10
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
Zn3C6O6 monolayer band gap by DFT-PBE0.82 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn3C6O6 monolayer band gap by DFTB-3ob1.98 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn3C6O6 monolayer band gap by GFN1-xTB0.81 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn3C6O6 monolayer band gap by GFN2-xTB0.60 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn3C6O6 monolayer band gap by DFT-HSE064.01 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn3C6O6 monolayer p-type power-factor advantage over n-typearound 0.3 mW m^-1 K^-2 higher for p-type doping compared to n-type dopingText
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer Seebeck coefficient peak by DFT-PBE, n-typearound 1200 uV/KText
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer Seebeck coefficient peak by DFT-PBE, p-typearound 1300 uV/KText
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer Seebeck coefficient by DFTB-3ob and DFT-HSE06Marked as a best value within this paperaround 1500 uV/K in both valence and conduction regionsText
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer Seebeck coefficient peak by GFN2-xTB, n-typearound 700 uV/KText
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer Seebeck coefficient peak by GFN2-xTB, p-typearound 800 uV/KText
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer maximum electrical conductivity by DFT-PBE/GFN1-xTBapproximately 0.2 x 10^5 ohm^-1 m^-120000 ohm^-1 m^-1Text
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer maximum electrical conductivity by DFTB-3ob and DFT-HSE06approximately 0.05 x 10^5 ohm^-1 m^-15000 ohm^-1 m^-1Text
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4
Zn3C6O6 monolayer maximum electrical conductivity by GFN2-xTBMarked as a best value within this paperapproximately 0.05 x 10^5 ohm^-1 m^-1 higher than DFT-PBE/GFN1-xTB, i.e. approximately 0.25 x 10^5 ohm^-1 m^-125000 ohm^-1 m^-1Calculated From Reported
Approximate
main p.7, article p.3982 · Thermoelectric Properties · Figure 4

DFT-PBE, GFN1-xTB, GFN2-xTB, DFTB-3ob band structure and BoltzTraP2 TE calculations

Zn3C6O6 serrated model · Model

Calculated at 300 K; natural and adjusted band-gap comparisons were made.

Temperature
300
Atmosphere
not_applicable
Geometry
serrated periodic cell
Context
model_system
Measurement source
main p.8, article p.3983 · Thermoelectric Properties · Figure 5
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
Serrated Zn3C6O6 electronic behaviourDFT-PBE semiconductor; GFN-xTB semimetallicText
Qualitative
main p.5, article p.3980 · Results and Discussion · Figure 1

DFT-PBE, GFN1-xTB, DFTB-3ob, DFT-HSE06; BoltzTraP2 TE calculations

Zn-NH-MOF AA-stacked model · Model

AA-stacked Zn-NH-MOF modelled as semiconductor; DFT-PBE and GFN-xTB compared for p/n transport.

Temperature
300
Atmosphere
not_applicable
Geometry
AA-stacked periodic cell
Context
model_system
Measurement source
main p.9, article p.3984 · Thermoelectric Properties · Figure 7
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
Zn-NH-MOF AA-stacked power factor by DFT-PBEMarked as a best value within this paperaround 0.4 mW m^-1 K^-2Text
Approximate
main p.10, article p.3985 · Thermoelectric Properties · Figure 7
Zn-NH-MOF AA-stacked electrical conductivity increase over monolayeraround 0.065 x 10^5 ohm^-1 m^-1 higher than the monolayer6500 ohm^-1 m^-1Text
Approximate
main p.9, article p.3984 · Thermoelectric Properties · Figure 7

DFT-PBE, GFN1-xTB, GFN2-xTB, DFTB-3ob, DFT-HSE06; band structure/DOS and BoltzTraP2

Wavy Zn-NH-MOF monolayer model · Model

Main wavy monolayer geometry; thermoelectric transport calculated at 300 K.

Temperature
300
Atmosphere
not_applicable
Geometry
wavy monolayer periodic cell
Context
model_system
Measurement source
main pp.8,12, article pp.3983,3987 · Results and Discussion · Figures 6, 10
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
Zn-NH-MOF flat-to-wavy monolayer n-type power-factor decreasedecrease by around 0.2 mW m^-1 K^-2Text
Approximate
main p.10, article p.3985 · Thermoelectric Properties · Figure 6 and Figure S13
Zn-NH-MOF flat-to-wavy monolayer Seebeck decreasedecrease by around 500 uV/KText
Approximate
main p.10, article p.3985 · Thermoelectric Properties · Figure 6 and Figure S13
Zn-NH-MOF flat-to-wavy monolayer n-type conductivity decreasedecrease by around 0.015 x 10^5 ohm^-1 m^-11500 ohm^-1 m^-1Text
Approximate
main p.10, article p.3985 · Thermoelectric Properties · Figure 6 and Figure S13
Zn-NH-MOF monolayer band gap by DFT-PBE0.36 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn-NH-MOF monolayer band gap by DFTB-3ob0.66 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn-NH-MOF monolayer band gap by GFN1-xTBMarked as a best value within this paper0.76 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn-NH-MOF monolayer band gap by GFN2-xTB0.66 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn-NH-MOF monolayer band gap by DFT-HSE060.73 eVText
Exact Reported
main p.12, article p.3987 · Results and Discussion · Figure 10
Zn-NH-MOF monolayer maximum Seebeck coefficient by DFT-PBEaround 520 uV/KText
Approximate
main p.8, article p.3983 · Thermoelectric Properties · Figure 6
Zn-NH-MOF monolayer maximum Seebeck coefficient by DFTB-3obaround 1170 uV/KText
Approximate
main p.8, article p.3983 · Thermoelectric Properties · Figure 6
Zn-NH-MOF monolayer maximum Seebeck coefficient by GFN1-xTBaround 915 uV/KText
Approximate
main p.8, article p.3983 · Thermoelectric Properties · Figure 6
Zn-NH-MOF monolayer maximum Seebeck coefficient by GFN2-xTBaround 1020 uV/KText
Approximate
main p.8, article p.3983 · Thermoelectric Properties · Figure 6
Zn-NH-MOF monolayer maximum Seebeck coefficient by DFT-HSE06Marked as a best value within this paperaround 1300 uV/KText
Approximate
main p.8, article p.3983 · Thermoelectric Properties · Figure 6

DFT-PBE, GFN1-xTB, GFN2-xTB, DFTB-3ob; BoltzTraP2 TE calculations

Zn-NH-MOF serrated model · Model

Serrated structures from DFT and SCC-DFTB differ; adjusted band-gap tests also performed.

Temperature
300
Atmosphere
not_applicable
Geometry
serrated periodic cell
Context
model_system
Measurement source
main p.11, article p.3986 · Thermoelectric Properties · Figure 8
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource