Diffraction Structure — Synthesis and structure of anhydrous Zn2EDTA metal-organic framework

Measurement evidence

Diffraction Structure

Synthesis and structure of anhydrous Zn2EDTA metal-organic framework · Starodubtseva A.A., Kan T.V., Marshenya S.N. et al. · Polyhedron · 2024 · 116750

4 measurement groups · 36 results

Reported values remain attached to the sample, method, conditions, extraction quality and source location that produced them.

checkCIF/PLATON validation of supplied structure factors

single crystal of Zn2EDTA picked from powder sample · Single Crystal

checkCIF/PLATON report for datablock zn2edta; PLATON version 06/07/2023, check.def 30/06/2023; wavelength 0.71073 A; temperature 110 K.

Temperature
110
Context
pristine anhydrous framework single-crystal structure
Measurement source
p001-p002 · checkCIF/PLATON report · Alert summary
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
checkCIF alert level A count0 ALERT level ASI Table
Exact Reported
p002 · checkCIF/PLATON report · Alert summary
checkCIF alert level G count7 ALERT level GSI Table
Exact Reported
p002 · checkCIF/PLATON report · Alert summary
checkCIF polymeric structure maximum dimensionmaximum dimension 3SI Table
Exact Reported
p002 · checkCIF/PLATON report · Alert summary
checkCIF data completeness1.0001 fractionSI Table
Exact Reported
p001 · checkCIF/PLATON report · Datablock summary

Powder X-ray diffraction with Rietveld phase quantification

pH-dependent Zn-EDTA hydrothermal powder series · Powder

Samples synthesised at pH 2.5-3.4 with Zn:EDTA 2:1; MiniFlex Benchtop Rigaku XRD with Cu source, lambda Kalpha1 = 1.54056 A and Kalpha2 = 1.54439 A; Rietveld with TOPAS.

Context
pH-dependent phase formation series
Measurement source
p002-p003 / journal pages 2-3 · Experimental; Results and discussions · Fig. 1
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
Optimal Zn:EDTA stoichiometric ratioMarked as a best value within this paper2:1Text
Exact Reported
p003 / journal page 3 · Results and discussions
Phase at pH 2.5Zn2(EDTA)H2O phase observed; Zn2EDTA fraction not reported and effectively absentText
Approximate
p003 / journal page 3 · Results and discussions · Fig. 1
Zn2EDTA fraction at pH 2.62.3%0.023 fractionText
Rounded Reported
p003 / journal page 3 · Results and discussions · Fig. 1
Zn2EDTA fraction at pH 2.7Marked as a best value within this paperpure Zn2EDTA phase1 fractionText
Approximate
p003 / journal page 3 · Results and discussions · Fig. 1
Zn2EDTA fraction at pH 2.865% Zn2EDTA and 35% Zn2EDTA(H2O)0.65 fractionText
Rounded Reported
p003 / journal page 3 · Results and discussions · Fig. 1
Zn2EDTA fraction at pH 2.931%0.31 fractionText
Rounded Reported
p003 / journal page 3 · Results and discussions · Fig. 1
Zn2EDTA fraction at pH 3.01.71%0.0171 fractionText
Exact Reported
p003 / journal page 3 · Results and discussions · Fig. 1
Zn2EDTA fraction at pH 3.4Zn2EDTA phase completely vanished0 fractionText
Approximate
p003 / journal page 3 · Results and discussions · Fig. 1

Powder X-ray diffraction Rietveld refinement using SCXRD structural model

pure anhydrous Zn2EDTA powder synthesised at pH 2.7 · Powder

PXRD data collected with Cu X-ray tube; Fig. 3 gives observed, calculated and difference plot with Rwp, Rexp and GOF.

Context
pristine anhydrous framework powder
Measurement source
p004-p005 / journal pages 4-5 · Results and discussions · Fig. 3
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
PXRD-refined unit-cell a12.9652(4) A(4)Visual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3
PXRD-refined unit-cell b7.0637(3) A(3)Visual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3
PXRD-refined beta angle94.760(2) deg(2)Visual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3
PXRD-refined unit-cell c14.1652(7) A(7)Visual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3
PXRD-refined cell volume1292.82(9) A3(9)Visual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3
Rietveld goodness of fitGOF = 3.16Visual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3
Rietveld expected R factorRexp = 2.77%0.0277 fractionVisual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3
Rietveld RwpRwp = 8.75%0.0875 fractionVisual Estimate
Rounded Reported
p005 / journal page 5 · Results and discussions · Fig. 3

Single-crystal X-ray diffraction; Bruker D8 QUEST; Mo-target X-ray tube; Olex2/ShelXT/ShelXL refinement

single crystal of Zn2EDTA picked from powder sample · Single Crystal

PHOTONII detector, Mo radiation; main text gives lambda = 0.73071 A but Table 1/CIF give MoKalpha lambda = 0.71073 A; crystal kept at 110.15 K; numerical absorption correction used for final solution.

Temperature
110.15
Atmosphere
liquid nitrogen cryostream
Context
pristine anhydrous framework
Measurement source
p002-p003 / journal pages 2-3 · Experimental; Results and discussions · Table 1
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
ZnO6 bond-length range1.981-2.311 AText
Range
p004 / journal page 4 · Results and discussions · Table 4
CIF chemical formula sumC5 H6 N O4 ZnSI Table
Exact Reported
text CIF · data_zn2edta · _chemical_formula_sum
CIF independent reflections used in refinement1710SI Table
Exact Reported
text CIF · data_zn2edta · _refine_ls_number_reflns
CIF diffraction radiation wavelength0.71073 ASI Table
Exact Reported
text CIF · data_zn2edta · _diffrn_radiation_wavelength
CIF reflections collected6049SI Table
Exact Reported
text CIF · data_zn2edta · _diffrn_reflns_number
SCXRD unit-cell a12.945(10) A(10)Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
SCXRD unit-cell b7.063(2) A(2)Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
SCXRD beta angle94.92(3) deg(3)Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
SCXRD unit-cell c14.142(10) A(10)Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
Calculated density2.160 g/cm3Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
Solvent-water inclusionNo vacancies or inclusion of solvent water foundText
Qualitative
p003-p004 / journal pages 3-4 · Results and discussions
Final R1 index for I >= 2 sigma(I)R1 = 0.0351Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
Space groupC2/cTable
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
SCXRD unit-cell volume1288.3(14) A3(14)Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
Z8Table
Exact Reported
p003 / journal page 3 · Results and discussions · Table 1
Framework connectivity and channelsEach EDTA molecule links four chains, forming a 3D network of channels suitable for interstitial ionic mobilityText
Qualitative
p004 / journal page 4 · Results and discussions · Fig. 2