Computational Modelling — Proton Transport in a Highly Conductive Porous Zirconium-Based Metal-Organic Framework: Molecular Insight

Measurement evidence

Computational Modelling

Proton Transport in a Highly Conductive Porous Zirconium-Based Metal-Organic Framework: Molecular Insight · Borges D.D., Devautour-Vinot S., Jobic H. et al. · Angewandte Chemie - International Edition · 2016 · 3919-3924

5 measurement groups · 23 results

Reported values remain attached to the sample, method, conditions, extraction quality and source location that produced them.

aMS-EVB3 molecular dynamics with DL-POLY-2, aSPC/Fw water and flexible MOF force field

fully hydrated UiO-66(Zr)-(CO2H)2 aMS-EVB3 model system · Model

NVE ensemble at 300, 350, 400 and 450 K; one cubic unit cell; 80 H2O per unit cell; one excess proton.

Temperature
300, 350, 400, 450
Atmosphere
simulation
Geometry
periodic cubic unit cell
Context
fully hydrated model system
Measurement source
5 · Experimental Section
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
simulated proton diffusion activation energy0.15 eVText
Exact Reported
3 · Results · Figure 3
simulated water diffusion activation energyEa = 0.20 eVText
Exact Reported
3 · Results · Figure 3

Hydrogen-bond network analysis

fully hydrated UiO-66(Zr)-(CO2H)2 aMS-EVB3 model system · Model

H2O molecules counted as hydrogen bonded if O-O distance <3.5 angstrom and angle <37 degrees; 10 ns MD trajectory.

Temperature
300, 350, 400, 450
Atmosphere
simulation
Geometry
periodic cubic unit cell
Context
fully hydrated model system
Measurement source
9 · Hydrogen-Bonded Network · Figures S11-S14
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
HB lifetime at 300 K>1000 ps>Figure Axis
Approximate
11 · Hydrogen-Bonded Network · Figure S13
HB lifetime at 350 K~193 ps~Figure Axis
Approximate
11 · Hydrogen-Bonded Network · Figure S13
HB lifetime at 400 K~50 ps~Figure Axis
Approximate
11 · Hydrogen-Bonded Network · Figure S13
HB lifetime at 450 KMarked as a best value within this paper~18 ps~Figure Axis
Approximate
4 · Results · Figure S13
average H-bonds per water molecule at 300 K2.4Text
Exact Reported
4 · Results
average H-bonds per water molecule at 450 K2.0Text
Exact Reported
4 · Results
water molecules in long HB network at high temperaturemore than 60% of total water moleculesmore thanText
Approximate
4 · Results · Figure S12
water residence time in tetrahedral cages at 300 Kca. 3 nsca.Text
Approximate
4 · Results · Figure S14
water residence time in tetrahedral cages at higher temperatureca. 125 psca.Text
Approximate
4 · Results · Figure S14

aMS-EVB3 pseudo-continuous time correlation function Cpc(t)

fully hydrated UiO-66(Zr)-(CO2H)2 aMS-EVB3 model system · Model

Tracking pivot hydronium conversion along MD runs at 300-450 K.

Temperature
300, 350, 400, 450
Atmosphere
simulation
Geometry
periodic cubic unit cell
Context
fully hydrated model system
Measurement source
3 · Results · Figure 4
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
pseudo-continuous relaxation time at 300 Kapproximately 270 psapproximatelyText
Approximate
3 · Results · Figure 4
pseudo-continuous relaxation time at 350 Ktau_pc approximately 84 psfigure labelFigure Axis
Approximate
3 · Results · Figure 4
pseudo-continuous relaxation time at 400 Ktau_pc approximately 38 psfigure labelFigure Axis
Approximate
3 · Results · Figure 4
pseudo-continuous relaxation time at 450 KMarked as a best value within this papertau_pc approximately 16 psfigure labelFigure Axis
Approximate
3 · Results · Figure 4

Radial distribution functions and coordination numbers

fully hydrated UiO-66(Zr)-(CO2H)2 aMS-EVB3 model system · Model

RDFs between grafted carboxylic oxygen and water oxygen, and between pivot hydronium oxygen and water oxygen.

Temperature
300, 350, 400, 450
Atmosphere
simulation
Geometry
periodic cubic unit cell
Context
fully hydrated model system
Measurement source
8 · Radial distribution functions · Figures S9-S10
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
coordination number at first minimum for O(H2O)-O(H3O+)integrates to 3.0Text
Exact Reported
4 · Results · Figure S10
RDF first peak for grafted CO2H oxygen to water oxygen2.7 angstromfigure annotationFigure Axis
Approximate
8 · Radial distribution functions · Figure S9
RDF second feature for grafted CO2H oxygen to water oxygen4.9 angstromfigure annotationFigure Axis
Approximate
8 · Radial distribution functions · Figure S9
RDF first peak for pivot hydronium oxygen to water oxygen2.5 angstromText
Exact Reported
4 · Results · Figure S10

Rotational autocorrelation functions for water

fully hydrated UiO-66(Zr)-(CO2H)2 aMS-EVB3 model system · Model

aMS-EVB3 MD at 300, 350, 400 and 450 K.

Temperature
300, 350, 400, 450
Atmosphere
simulation
Geometry
periodic cubic unit cell
Context
fully hydrated model system
Measurement source
8 · aMS-EVB MD simulations · Figure S8
PropertyReported valueNormalised valueUncertaintyOrigin and qualitySource
simulated water rotational relaxation time at 300 K21.5 psCaption
Exact Reported
8 · Water rotation · Figure S8
simulated water rotational relaxation time at 350 K4.1 psCaption
Exact Reported
8 · Water rotation · Figure S8
simulated water rotational relaxation time at 400 K1.5 psCaption
Exact Reported
8 · Water rotation · Figure S8
simulated water rotational relaxation time at 450 KMarked as a best value within this paper0.8 psCaption
Exact Reported
8 · Water rotation · Figure S8